Insertion junction: LMJ.RY0402.177860_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.177860
Chromosome:chromosome 16
Location:4648232
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g687450 CPLD54 (1 of 1) PTHR16254//PTHR16254:SF6 - POTASSIUM/PROTON ANTIPORTER-RELATED // K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC; potassium ion transmembrane transporter 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTCAGCGCGGCTGAGCGCTGGTCCGGGC
Internal bar code:GGGAGGTCGTTGTGTAAACGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:681
LEAP-Seq percent confirming:99.853
LEAP-Seq n confirming:3397
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AACGGATTCGTCCTTCACAC
Suggested primer 2:ATCGAACTGCTGATGCACTG