Insertion junction: LMJ.RY0402.177897_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.177897
Chromosome:chromosome 5
Location:3426667
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g241250 (1 of 1) IPR000104//IPR000253//IPR001357 - Antifreeze protein, type I // Forkhead-associated (FHA) domain // BRCT domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGGATCAAGCCCGACCCAGGCGCCGCGG
Internal bar code:ACCCGAGCCAAGTGCTCAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:77
LEAP-Seq percent confirming:34.5646
LEAP-Seq n confirming:131
LEAP-Seq n nonconfirming:248
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGATCAGCTGGAAGACGAAG
Suggested primer 2:CACCAGTCTATCCTGGGCAT