Insertion junction: LMJ.RY0402.177918_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.177918
Chromosome:chromosome 1
Location:5555179
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g039450 (1 of 2) PTHR34548//PTHR34548:SF2 - FAMILY NOT NAMED // PROTEIN TIC 21, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGGAACCGTGACGAAAGCCGACCGCATT
Internal bar code:ATCTTAGCATGTACAGGTATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:772
LEAP-Seq percent confirming:99.3007
LEAP-Seq n confirming:284
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGGGAGCACTATTTGGAC
Suggested primer 2:CCCGAAGAAGGACTTGACTG