Insertion junction: LMJ.RY0402.177938_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.177938
Chromosome:chromosome 9
Location:2114555
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g393650 (1 of 1) PF00069//PF01590 - Protein kinase domain (Pkinase) // GAF domain (GAF) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCCTGTGCGTGCGCGGGCGGGCCGAGA
Internal bar code:TTGCGGGTCGTTACAGCTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:643
LEAP-Seq percent confirming:99.6907
LEAP-Seq n confirming:4835
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GGTACGGTAGCCTTCCATGA
Suggested primer 2:TGTGTAAGAGTGCCCTTCCC