Insertion junction: LMJ.RY0402.177952_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.177952
Chromosome:chromosome 8
Location:3693768
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g376740 (1 of 1) IPR008979//IPR018392 - Galactose-binding domain-like // LysM domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATGACACGATCTGGTGGCTGGAGCAGG
Internal bar code:CGCGTAGGTTTAGGTTTGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:242
LEAP-Seq percent confirming:82.0155
LEAP-Seq n confirming:529
LEAP-Seq n nonconfirming:116
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTGCCTTGTTACTTCCA
Suggested primer 2:AGCACTACCCAAATGTTGCC