Insertion junction: LMJ.RY0402.177957_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.177957
Chromosome:chromosome 8
Location:2545187
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g372300 (1 of 1) IPR000104//IPR000620 - Antifreeze protein, type I // EamA domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCAGGTGCGACATCGCCCCTCTCCATG
Internal bar code:TCGATACACGGATGGGCACAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:86
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:98
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGCTTTGAAATGTTGCAG
Suggested primer 2:AGTCCCCACCAAGACAACTG