Insertion junction: LMJ.RY0402.178051_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.178051
Chromosome:chromosome_9
Location:4738863
Confidence (%):73
Locus systematic id Locus common name Defline Orientation Feature
Cre09.g397142 TRP15 Transient receptor potential ion channel protein antisense intron

Insertion site details

Flanking sequence (orientation from cassette outwards):AGAGGCGATGAGAGAGGCGGGGGACGGAGG
Internal bar code:AAAGACGATTGTAGAGATGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:523
LEAP-Seq percent confirming:65.2715
LEAP-Seq n confirming:577
LEAP-Seq n nonconfirming:307
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGTGAGCAGAAGTTAAGG
Suggested primer 2:CTTTGGCTGGGTTTGGTTTA