Insertion junction: LMJ.RY0402.178238_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.178238
Chromosome:chromosome 9
Location:1999787
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g394550 RPPK2 ribose-phosphate pyrophosphokinase; (1 of 1) PTHR10210//PTHR10210:SF45 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE // RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 3, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGTTGCTGACGCTGCCTCCCCCTCCGCC
Internal bar code:ACTGCGCGTTGGAATCGCGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:914
LEAP-Seq percent confirming:99.3863
LEAP-Seq n confirming:3401
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CGACTTAGCCTCAGCCAAAC
Suggested primer 2:GTCTTGCCCTAGCCTCTCCT