Insertion junction: LMJ.RY0402.178238_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.178238
Chromosome:chromosome 9
Location:1999811
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g394550 RPPK2 ribose-phosphate pyrophosphokinase; (1 of 1) PTHR10210//PTHR10210:SF45 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE // RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 3, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGAGGCTGCGGTGTCGGCGCAACATTCA
Internal bar code:ATTTTAGATAATGCTTCTCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1074
LEAP-Seq percent confirming:98.5319
LEAP-Seq n confirming:3490
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGACTTAGCCTCAGCCAAAC
Suggested primer 2:GTCTTGCCCTAGCCTCTCCT