Insertion junction: LMJ.RY0402.178428_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.178428
Chromosome:chromosome 1
Location:2649348
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g015500 CGL91 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTTGCCGAACCAGTCCTGGTCCTTGAGG
Internal bar code:GCGCACATATACACCTGACGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:995
LEAP-Seq percent confirming:99.4479
LEAP-Seq n confirming:2882
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AAGACAGGGTGGAAGGTGTG
Suggested primer 2:CTTTGCAACGCTGTAAGCAG