Insertion junction: LMJ.RY0402.178512_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.178512
Chromosome:chromosome 9
Location:5760525
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g401849 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAAGTCCGTGCGTGTCCTTGCAGCCGGC
Internal bar code:TGGCGAGGGCCCCCGGGTTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:301
LEAP-Seq percent confirming:99.3885
LEAP-Seq n confirming:8452
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCGGAAGGAATTGTGCT
Suggested primer 2:AGACATGGGACCAAACTTGC