Insertion junction: LMJ.RY0402.178512_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.178512
Chromosome:chromosome 9
Location:5760527
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g401849 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACAAGCTTGGGCGTGTCTGTGTCCCTG
Internal bar code:AACGAAAAAGGAGCCCTGCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1003
LEAP-Seq percent confirming:99.9117
LEAP-Seq n confirming:2262
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCGGAAGGAATTGTGCT
Suggested primer 2:AGACATGGGACCAAACTTGC