Insertion junction: LMJ.RY0402.178543_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.178543
Chromosome:chromosome 6
Location:5021240
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g280250 (1 of 1) PTHR31018:SF3 - CELL WALL MANNOPROTEIN PST1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATCCGGCTGACCACTGCACTTACGTGA
Internal bar code:GAGGCAGGCCGGGCGAGCCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:793
LEAP-Seq percent confirming:94.9555
LEAP-Seq n confirming:960
LEAP-Seq n nonconfirming:51
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGCACAATGCCGAATAC
Suggested primer 2:CTGCCTGGACTGCACTCATA