Insertion junction: LMJ.RY0402.178625_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.178625
Chromosome:chromosome 8
Location:4845605
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g384600 (1 of 2) 3.1.1.81 - Quorum-quenching N-acyl-homoserine lactonase / Quorum-quenching N-acyl homoserine lactone hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATCTGGCGTGTGTGCCATCGCTGCGGGA
Internal bar code:TGTCTTGGTACATTTCCGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:394
LEAP-Seq percent confirming:99.3212
LEAP-Seq n confirming:21069
LEAP-Seq n nonconfirming:144
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCATCACAAGAGCACACA
Suggested primer 2:GGGCAGCACGCATTACTACT