Insertion junction: LMJ.RY0402.178885_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.178885
Chromosome:chromosome 15
Location:526796
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre15.g637000 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGACTCTTGGCTGGCCCCTGCTGGCCC
Internal bar code:GGCACAAAGAGGCTTATGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:811
LEAP-Seq percent confirming:98.2746
LEAP-Seq n confirming:1310
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AAATTACAACTTGACGGGCG
Suggested primer 2:CCAGACTTCGGAGGCTGTAG