Insertion junction: LMJ.RY0402.179014_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.179014
Chromosome:chromosome 1
Location:2958091
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g018050 NEF1 (1 of 1) PTHR35313//PTHR35313:SF1 - FAMILY NOT NAMED // NO EXINE FORMATION 1; NEF1-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGTAACGCGTACTCCCGTGCTGCTTCCC
Internal bar code:ACCGCATGTGGTGTGGTCAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:551
LEAP-Seq percent confirming:98.9933
LEAP-Seq n confirming:590
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCCCTTGCTTCTCTTTTA
Suggested primer 2:GTACAGCAGCAGCACATGGT