Insertion junction: LMJ.RY0402.179042_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.179042
Chromosome:chromosome 3
Location:403670
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g144887 (1 of 1) IPR000048//IPR003590//IPR006553 - IQ motif, EF-hand binding site // Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGAAAGGGACGGAAATAATTATGACAAG
Internal bar code:TGACTATGTTCAGTAGCGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1
LEAP-Seq percent confirming:69.3506
LEAP-Seq n confirming:534
LEAP-Seq n nonconfirming:236
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACCATGGCTATGGCAACTTC
Suggested primer 2:CAAACAATCCCCTCTCCTCA