Insertion junction: LMJ.RY0402.179050_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.179050
Chromosome:chromosome 16
Location:1129928
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g650050 (1 of 2) PTHR12231//PTHR12231:SF112 - CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN // RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCATCGTCGATGGTATGAGCAACATGTG
Internal bar code:CGTCACAACCACGCGGCTCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:664
LEAP-Seq percent confirming:99.4253
LEAP-Seq n confirming:2249
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGTGAACGGTGTGTGAT
Suggested primer 2:GTCGAGGCAGGAAGAAGTTG