Insertion junction: LMJ.RY0402.179191_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.179191
Chromosome:chromosome 9
Location:7078650
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g411600 (1 of 3) IPR000104//IPR001005//IPR009057//IPR017877//IPR017930 - Antifreeze protein, type I // SANT/Myb domain // Homeodomain-like // Myb-like domain // Myb domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTATATGTATTGCCGACCTCGCTGCTCGG
Internal bar code:CACGACGATTCCGGTGCCCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:505
LEAP-Seq percent confirming:94.7704
LEAP-Seq n confirming:743
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTCGCTAGGGATTGAGT
Suggested primer 2:CTCTCGCTCACCCGTAAAAG