Insertion junction: LMJ.RY0402.179283_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.179283
Chromosome:chromosome 13
Location:1406238
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g571950 (1 of 1) 2.1.1.104 - Caffeoyl-CoA O-methyltransferase / Trans-caffeoyl-CoA 3-O-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACCAGCGCGTGCTTGCGTCCACTAGATG
Internal bar code:CTGGCCCCAATAAAACGTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1005
LEAP-Seq percent confirming:99.8004
LEAP-Seq n confirming:500
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTGTCAGGCTAGGGACT
Suggested primer 2:TATTGGTGGAGGGAGCAGAC