Insertion junction: LMJ.RY0402.179347_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.179347
Chromosome:chromosome 1
Location:902091
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g004850 TXE1 Transcription elongation factor; (1 of 1) PTHR30195//PTHR30195:SF13 - TYPE I SITE-SPECIFIC DEOXYRIBONUCLEASE PROTEIN SUBUNIT M AND R // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAAGGCAGGTCCCGTCGCTGGATGGTGGC
Internal bar code:TGGAACTCGGTAGCGCGGATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:976
LEAP-Seq percent confirming:99.0973
LEAP-Seq n confirming:2964
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGAGAAGGTATGTGCGT
Suggested primer 2:GGGGATTAGACTCTCCTGGC