Insertion junction: LMJ.RY0402.179414_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.179414
Chromosome:chromosome 17
Location:889193
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g702650 (1 of 10) PF00505 - HMG (high mobility group) box (HMG_box); High mobility group protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCCTGTACGCTCCAAGCAACCCCTTAT
Internal bar code:CGGGAAAAAAGTGTTGGGGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:208
LEAP-Seq percent confirming:99.7625
LEAP-Seq n confirming:840
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGCAAGACCACTCCAAG
Suggested primer 2:TATCTGCAGCCCCTGATACC