Insertion junction: LMJ.RY0402.179463_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.179463
Chromosome:chromosome 12
Location:5771245
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g533250 (1 of 2) IPR000104//IPR001394//IPR028889 - Antifreeze protein, type I // Peptidase C19, ubiquitin carboxyl-terminal hydrolase // Ubiquitin specific protease domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTCGCAGCCTGGCTGCTGTGCCTGCGC
Internal bar code:GGAGGTCACACGAGCCGGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:317
LEAP-Seq percent confirming:97.3168
LEAP-Seq n confirming:1487
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GAACACCACTACCACCACCC
Suggested primer 2:GCGTGTGTGTGTGTGTGTGT