Insertion junction: LMJ.RY0402.179480_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.179480
Chromosome:chromosome 12
Location:7145828
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g559000 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTACATGGGTGATGAGCCAATGAGTACTG
Internal bar code:CGCGATGTGCCTTTTCGATGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:945
LEAP-Seq percent confirming:38.9697
LEAP-Seq n confirming:4932
LEAP-Seq n nonconfirming:7724
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGCATACCCCTTGTTCT
Suggested primer 2:GAGCCGGACCATTTAACTCA