Insertion junction: LMJ.RY0402.179519_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.179519
Chromosome:chromosome 5
Location:2204634
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g234653 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCTTACAACCTGGTGCAGACCCAGGAGG
Internal bar code:GCGGACCCGCACTCCGGAAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:408
LEAP-Seq percent confirming:65.6927
LEAP-Seq n confirming:5823
LEAP-Seq n nonconfirming:3041
LEAP-Seq n unique pos:101

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTACTGCACCGCACCATA
Suggested primer 2:ACGCACACACACACACACAC