Insertion junction: LMJ.RY0402.179570_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.179570
Chromosome:chromosome 6
Location:8847654
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g310601 TNP19 putative transposase; (1 of 781) IPR000104 - Antifreeze protein, type I CDS|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCGTGACGACGATGACGTGCGGGGGGGT
Internal bar code:AGAGAATCGTGTTGCGGTGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:186
LEAP-Seq percent confirming:30.9426
LEAP-Seq n confirming:3253
LEAP-Seq n nonconfirming:7260
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CGTACTCGTCCTCCACGATT
Suggested primer 2:ACAATCACACGACCACAGGA