Insertion junction: LMJ.RY0402.179687_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.179687
Chromosome:chromosome 9
Location:7212353
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g412350 (1 of 1) PTHR16557:SF4 - 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE FAMILY PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGCGGGGCAGAGCGGCTCTCCTGCGGTC
Internal bar code:ACTTGGAATCCACGAGCTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:469
LEAP-Seq percent confirming:95.9831
LEAP-Seq n confirming:7288
LEAP-Seq n nonconfirming:305
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGAAATAGGTTGCGTCA
Suggested primer 2:ACGCCAACTCACCTACAACC