Insertion junction: LMJ.RY0402.179716_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.179716
Chromosome:chromosome 2
Location:6971695
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre02.g134124 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCCCACGCTCGCCGCGCTGCAGAGCCT
Internal bar code:TTGGAGGGTAGTGCGTTGTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:111
LEAP-Seq percent confirming:98.1132
LEAP-Seq n confirming:468
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACACACACACAC
Suggested primer 2:CCCAAACACACTGCTGAAAA