Insertion junction: LMJ.RY0402.179808_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.179808
Chromosome:chromosome 8
Location:3630411
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre08.g376200 (1 of 1) IPR000104//IPR013026//IPR019734 - Antifreeze protein, type I // Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGGAGCATCCCTTGCGTGCGGTCAACT
Internal bar code:GCGTTGTGTTATAGACTATGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:289
LEAP-Seq percent confirming:80.0622
LEAP-Seq n confirming:4373
LEAP-Seq n nonconfirming:1089
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GATGTCTTGGGTCAGACGGT
Suggested primer 2:AACATGCCTTTCAACCGTTC