Insertion junction: LMJ.RY0402.179814_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.179814
Chromosome:chromosome 6
Location:5435366
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g284250 LHCBM8 (1 of 6) K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1); Light-harvesting Chlorophyll a/b binding protein of LHCII 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCCATGCCACCCTGGCTACTTGGACGC
Internal bar code:GGTACGGCAAGTTTTTTTGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:615
LEAP-Seq percent confirming:96.6851
LEAP-Seq n confirming:175
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTATTCGGAGCGAGCAAC
Suggested primer 2:GGGAGTATGCTACTTGCCCA