Insertion junction: LMJ.RY0402.179882_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.179882
Chromosome:chromosome 16
Location:1050596
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g649433 (1 of 4) IPR000104//IPR001471//IPR016177 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATAGTACGATGCATTGCATCAGCAGGA
Internal bar code:CATTGTTAGTCACTACGTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:625
LEAP-Seq percent confirming:94.0433
LEAP-Seq n confirming:7594
LEAP-Seq n nonconfirming:481
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGTGGGCCGTTTATTTT
Suggested primer 2:TCATCATGTCAGCTTGCCTC