Insertion junction: LMJ.RY0402.179895_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.179895
Chromosome:chromosome 12
Location:1238203
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g489450 (1 of 2) IPR017993 - Atrophin-1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGGCGTTGTACCAGCCGCCTCATGCCTT
Internal bar code:GCTCTCCTGAACTCTCGGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:985
LEAP-Seq percent confirming:99.507
LEAP-Seq n confirming:3431
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTAGAGGGTGGTAGTGCC
Suggested primer 2:ATATGCGGCAACCGAACTAC