Insertion junction: LMJ.RY0402.179960_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.179960
Chromosome:chromosome 6
Location:3055534
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g274450 SMM20 (1 of 5) PTHR13271//PTHR13271:SF28 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED; S-adenosyl-L-methionine-dependent methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCACTGCTGAGGCGAAGCTGGAAGAGA
Internal bar code:CTCCCCGACTTTTAGGGGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:532
LEAP-Seq percent confirming:95.3448
LEAP-Seq n confirming:3277
LEAP-Seq n nonconfirming:160
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TCAATGTTTCTCGTTGAGCG
Suggested primer 2:GACTTCACGAACCTGGTGGT