Insertion junction: LMJ.RY0402.180028_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.180028
Chromosome:chromosome 7
Location:4906311
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g346317 GT90F39,GT90-39 GT90 family protein 39; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGCAGCTAGGGGGGAGGGTGCGGGTAC
Internal bar code:AAGCGGCTGGTCTTCTCCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:779
LEAP-Seq percent confirming:93.4555
LEAP-Seq n confirming:20449
LEAP-Seq n nonconfirming:1432
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGCAAACGCAGAATTAG
Suggested primer 2:GCGTGTGTGTGTGTGTGTGT