Insertion junction: LMJ.RY0402.180056_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.180056
Chromosome:chromosome 1
Location:1488181
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g007651 PUS10 (1 of 1) 5.4.99.27 - tRNA pseudouridine(13) synthase / tRNA Psi(13) synthase; RNA pseudouridine synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGTACCGCTTTTCCTACCAGCTTTGCA
Internal bar code:ACGCATGAGTTCGCCGGCCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:429
LEAP-Seq percent confirming:79.5455
LEAP-Seq n confirming:140
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCACACCTGCTACACTGC
Suggested primer 2:GCTTTCCTGAAGGAGTGTGC