Insertion junction: LMJ.RY0402.180074_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.180074
Chromosome:chromosome 6
Location:3904595
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g278181 (1 of 4) IPR000104//IPR001471//IPR016177 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAACATAAACAGAACACGCTCTCCGTCCA
Internal bar code:AGTAATTGTCGCGAATAGCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:928
LEAP-Seq percent confirming:98.5631
LEAP-Seq n confirming:2881
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTCGATGTGCTAGGGAA
Suggested primer 2:AATTGCAGATTTCGTTTGCC