Insertion junction: LMJ.RY0402.180085_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.180085
Chromosome:chromosome 5
Location:3028031
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g238550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGTGCCGTGTGATATGTGGCAGGTCGGG
Internal bar code:CCCTAATAGGGTCACCTTCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:420
LEAP-Seq percent confirming:88.8247
LEAP-Seq n confirming:1383
LEAP-Seq n nonconfirming:174
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AACGTCTACGATACCGCCAC
Suggested primer 2:CTGGTGTGGCTGTGGTTATG