Insertion junction: LMJ.RY0402.180108_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.180108
Chromosome:chromosome 6
Location:3765196
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g278158 (1 of 2) IPR001283//IPR003882//IPR014044 - Cysteine-rich secretory protein, allergen V5/Tpx-1-related // Pistil-specific extensin-like protein // CAP domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGAGGGGCGGCCACTGTTGTGGTGCAGGT
Internal bar code:GCACGGCCGGTGCGTGGTGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1110
LEAP-Seq percent confirming:96.6412
LEAP-Seq n confirming:6071
LEAP-Seq n nonconfirming:211
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGGAGGTGGAGGAGGAGA
Suggested primer 2:TTCCTGCGAGTGCTTAACCT