Insertion junction: LMJ.RY0402.180108_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.180108
Chromosome:chromosome 6
Location:3765198
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g278158 (1 of 2) IPR001283//IPR003882//IPR014044 - Cysteine-rich secretory protein, allergen V5/Tpx-1-related // Pistil-specific extensin-like protein // CAP domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGATCTGCCTTCGCTTCTCACGGGACAA
Internal bar code:AAGCCAGCCGCCATGCTAAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:242
LEAP-Seq percent confirming:96.3177
LEAP-Seq n confirming:2171
LEAP-Seq n nonconfirming:83
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCTGCGAGTGCTTAACCT
Suggested primer 2:AAAGGAGGTGGAGGAGGAGA