Insertion junction: LMJ.RY0402.180247_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.180247
Chromosome:chromosome 9
Location:4205870
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g394251 PF16 Central pair associated protein; (1 of 1) PF00514//PF13513 - Armadillo/beta-catenin-like repeat (Arm) // HEAT-like repeat (HEAT_EZ) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTAGCATCAGCGCATAGACGGCATAGTA
Internal bar code:GGACCCACAATGAGCGAAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:348
LEAP-Seq percent confirming:98.0222
LEAP-Seq n confirming:793
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGTCTCACGAAGAGTGG
Suggested primer 2:TCTTTCGTCGCTGACACATC