Insertion junction: LMJ.RY0402.180261_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.180261
Chromosome:chromosome 6
Location:5868629
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g287950 SRH13 (1 of 1) K10779//K10876 - transcriptional regulator ATRX [EC:3.6.4.12] (ATRX) // RAD54-like protein 2 [EC:3.6.4.12] (RAD54L2); SNF2-related DNA/RNA helicase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGATGGAGTGACCCAAAACCGGAAGCAC
Internal bar code:GCGGGCGTGTTTGGGCCAGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:552
LEAP-Seq percent confirming:99.7602
LEAP-Seq n confirming:1664
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGATGAGGATGAGGAGGA
Suggested primer 2:GTGACGGTAATTGAACCGCT