Insertion junction: LMJ.RY0402.180281_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.180281
Chromosome:chromosome 9
Location:3524154
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g389838 (1 of 1) IPR000504//IPR002750//IPR012677 - RNA recognition motif domain // CobE/GbiG C-terminal domain // Nucleotide-binding alpha-beta plait domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTAACAGACGCCAGCTCAAAGGGATGCAC
Internal bar code:TTCGTAGGTCGGAGGATTGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:845
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:588
LEAP-Seq n nonconfirming:196
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCTGACACGTATTGGGT
Suggested primer 2:TGCAGCAACACGTACAACAA