Insertion junction: LMJ.RY0402.180342_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.180342
Chromosome:chromosome 9
Location:5548938
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g400627 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAAACGTGGAGCTAGCCTCCACACCGGG
Internal bar code:AAATGCGGATCCCGACTAGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1085
LEAP-Seq percent confirming:95.1454
LEAP-Seq n confirming:4841
LEAP-Seq n nonconfirming:247
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCGCTAAACCCTCCATC
Suggested primer 2:GCGGGAGTGTATCCACTGAT