Insertion junction: LMJ.RY0402.180408_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.180408
Chromosome:chromosome 8
Location:1680115
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g365720 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACGCGCAGCCACTAAGGTAGCCGGCAAG
Internal bar code:CTCATCCGTCGCTCGCAGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:217
LEAP-Seq percent confirming:72.2222
LEAP-Seq n confirming:182
LEAP-Seq n nonconfirming:70
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACCAGAAGGTGATGG
Suggested primer 2:CCTCGTATCTGCGCTCTACC