Insertion junction: LMJ.RY0402.180557_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.180557
Chromosome:chromosome 9
Location:5698952
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g401515 (1 of 1) IPR017927//IPR017938 - Ferredoxin reductase-type FAD-binding domain // Riboflavin synthase-like beta-barrel 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCAGCACACCACAAAACGGCACCAGCGT
Internal bar code:CCACCTCTCCGGTACTAATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:256
LEAP-Seq percent confirming:99.201
LEAP-Seq n confirming:1614
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTACCGACTGTGGTGCCT
Suggested primer 2:CCGTGTGTGTGTGTGTGTGT