Insertion junction: LMJ.RY0402.180652_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.180652
Chromosome:chromosome 12
Location:3820859
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g515400 (1 of 17) PF08016 - Polycystin cation channel (PKD_channel) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCATCATGCCCGCCCAGTCCACCGCGC
Internal bar code:ACCCTTAGAGCTCCACTAAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:558
LEAP-Seq percent confirming:91.9414
LEAP-Seq n confirming:1004
LEAP-Seq n nonconfirming:88
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AACTTCAGAACCCCCGAACT
Suggested primer 2:CTCCTGGGTGTGCAATACCT