Insertion junction: LMJ.RY0402.180687_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.180687
Chromosome:chromosome 3
Location:2284218
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g158050 PPP11 (1 of 1) PF00686//PF07228 - Starch binding domain (CBM_20) // Stage II sporulation protein E (SpoIIE) (SpoIIE); Phosphoprotein phosphatase 2C-related 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGATTAGGGAAAGGTTGAGCTCTGTATGG
Internal bar code:GACAGGGACATTCTGGGCGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:632
LEAP-Seq percent confirming:99.4814
LEAP-Seq n confirming:10934
LEAP-Seq n nonconfirming:57
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCTATAAAGCGCCCTCTG
Suggested primer 2:TGAAGTCTCCTGCGACAATG