Insertion junction: LMJ.RY0402.180794_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.180794
Chromosome:chromosome 1
Location:6304490
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g044900 (1 of 5) PTHR10351:SF42 - LD40663P intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACTCTTGAACTGGCAAAACCAATTGCAA
Internal bar code:TAGGTCCTAGGTCCGTGGCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:573
LEAP-Seq percent confirming:95.9759
LEAP-Seq n confirming:477
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGTGTGCTGTGTCGCTC
Suggested primer 2:TCACTGCTGGAAGAGGAGGT