Insertion junction: LMJ.RY0402.180859_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.180859
Chromosome:chromosome 3
Location:8200412
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g200050 CAL1 (1 of 2) PF13202//PF13833 - EF hand (EF-hand_5) // EF-hand domain pair (EF-hand_8); Calpain family cysteine protease 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACGAAACAAAGAGAGCGCCGGATACAC
Internal bar code:AGTAGTTCGGGCTCTGTAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:580
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTGCGGGATAGACCATTG
Suggested primer 2:CATGTGTGCTGTTGGGAAAC