Insertion junction: LMJ.RY0402.181258_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.181258
Chromosome:chromosome 16
Location:2142928
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g658150 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGCCAGCTCGCCAGCTCCCGGCCCGGA
Internal bar code:TCGCTCTCGGCTAGTACGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:186
LEAP-Seq percent confirming:99.5455
LEAP-Seq n confirming:219
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTGATTTCTGCAGCACCAAG
Suggested primer 2:CATAAGTTGCACGCCTCTGA